All modules for which code is available

• autoprot.analysis.PCA
• autoprot.analysis.clustering
• autoprot.analysis.functional
• autoprot.analysis.qc
• autoprot.analysis.stat_test
• autoprot.analysis.stats
• autoprot.preprocessing.annotation
• autoprot.preprocessing.data_handling
• autoprot.preprocessing.filtering
• autoprot.preprocessing.imputation
• autoprot.preprocessing.normalization
• autoprot.preprocessing.transformation
• autoprot.visualization.annotation
• autoprot.visualization.basic
• autoprot.visualization.qc